Networks In Systems Biology

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Networks In Systems Biology


Networks In Systems Biology
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Networks Of Networks In Biology


Networks Of Networks In Biology
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Author : Narsis A. Kiani
language : en
Publisher: Cambridge University Press
Release Date : 2021-03-31

Networks Of Networks In Biology written by Narsis A. Kiani and has been published by Cambridge University Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2021-03-31 with Computers categories.


Introduces network inspired approaches for the analysis and integration of large, heterogeneous data sets in the life sciences.

Networks In Systems Biology


Networks In Systems Biology
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Author : Fabricio Alves Barbosa da Silva
language : en
Publisher: Springer Nature
Release Date : 2020-10-03

Networks In Systems Biology written by Fabricio Alves Barbosa da Silva and has been published by Springer Nature this book supported file pdf, txt, epub, kindle and other format this book has been release on 2020-10-03 with Computers categories.


This book presents a range of current research topics in biological network modeling, as well as its application in studies on human hosts, pathogens, and diseases. Systems biology is a rapidly expanding field that involves the study of biological systems through the mathematical modeling and analysis of large volumes of biological data. Gathering contributions from renowned experts in the field, some of the topics discussed in depth here include networks in systems biology, the computational modeling of multidrug-resistant bacteria, and systems biology of cancer. Given its scope, the book is intended for researchers, advanced students, and practitioners of systems biology. The chapters are research-oriented, and present some of the latest findings on their respective topics.

Biological Networks


Biological Networks
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Author : Fran‡ois K‚pŠs
language : en
Publisher: World Scientific
Release Date : 2007

Biological Networks written by Fran‡ois K‚pŠs and has been published by World Scientific this book supported file pdf, txt, epub, kindle and other format this book has been release on 2007 with Science categories.


This volume presents a timely and comprehensive overview of biological networks at all organization levels in the spirit of the complex system approach. It discusses the transversal issues and fundamental principles as well as the overall structure, dynamics, and modeling of a wide array of biological networks at the molecular, cellular, and population levels. Anchored in both empirical data and a strong theoretical background, the book therefore lends valuable credence to the complex systems approach.

Biomolecular Networks


Biomolecular Networks
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Author : Luonan Chen
language : en
Publisher: John Wiley & Sons
Release Date : 2009-06-29

Biomolecular Networks written by Luonan Chen and has been published by John Wiley & Sons this book supported file pdf, txt, epub, kindle and other format this book has been release on 2009-06-29 with Computers categories.


Alternative techniques and tools for analyzing biomolecular networks With the recent rapid advances in molecular biology, high-throughput experimental methods have resulted in enormous amounts of data that can be used to study biomolecular networks in living organisms. With this development has come recognition of the fact that a complicated living organism cannot be fully understood by merely analyzing individual components. Rather, it is the interactions of components or biomolecular networks that are ultimately responsible for an organism's form and function. This book addresses the important need for a new set of computational tools to reveal essential biological mechanisms from a systems biology approach. Readers will get comprehensive coverage of analyzing biomolecular networks in cellular systems based on available experimental data with an emphasis on the aspects of network, system, integration, and engineering. Each topic is treated in depth with specific biological problems and novel computational methods: GENE NETWORKS—Transcriptional regulation; reconstruction of gene regulatory networks; and inference of transcriptional regulatory networks PROTEIN INTERACTION NETWORKS—Prediction of protein-protein interactions; topological structure of biomolecular networks; alignment of biomolecular networks; and network-based prediction of protein function METABOLIC NETWORKS AND SIGNALING NETWORKS—Analysis, reconstruction, and applications of metabolic networks; modeling and inference of signaling networks; and other topics and new trends In addition to theoretical results and methods, many computational software tools are referenced and available from the authors' Web sites. Biomolecular Networks is an indispensable reference for researchers and graduate students in bioinformatics, computational biology, systems biology, computer science, and applied mathematics.

Fundamentals Of Network Biology


Fundamentals Of Network Biology
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Author : Zhang Wenjun
language : en
Publisher: World Scientific
Release Date : 2018-05-16

Fundamentals Of Network Biology written by Zhang Wenjun and has been published by World Scientific this book supported file pdf, txt, epub, kindle and other format this book has been release on 2018-05-16 with Science categories.


As the first comprehensive title on network biology, this book covers a wide range of subjects including scientific fundamentals (graphs, networks, etc) of network biology, construction and analysis of biological networks, methods for identifying crucial nodes in biological networks, link prediction, flow analysis, network dynamics, evolution, simulation and control, ecological networks, social networks, molecular and cellular networks, network pharmacology and network toxicology, big data analytics, and more. Across 12 parts and 26 chapters, with Matlab codes provided for most models and algorithms, this self-contained title provides an in-depth and complete insight on network biology. It is a valuable read for high-level undergraduates and postgraduates in the areas of biology, ecology, environmental sciences, medical science, computational science, applied mathematics, and social science. Contents: Mathematical Fundamentals: Fundamentals of Graph TheoryGraph AlgorithmsFundamentals of Network TheoryOther FundamentalsCrucial Nodes/Subnetworks/Modules, Network Types, and Structural Comparison: Identification of Crucial Nodes and Subnetworks/ModulesDetection of Network TypesComparison of Network StructureNetwork Dynamics, Evolution, Simulation and Control: Network DynamicsNetwork Robustness and Sensitivity AnalysisNetwork ControlNetwork EvolutionCellular AutomataSelf-OrganizationAgent-based ModelingFlow Analysis: Flow/Flux AnalysisLink and Node Prediction: Link Prediction: Sampling-based MethodsLink Prediction: Structure- and Perturbation-based MethodsLink Prediction: Node-Similarity-based MethodsNode PredictionNetwork Construction: Construction of Biological NetworksPharmacological and Toxicological Networks: Network Pharmacology and ToxicologyEcological Networks: Food WebsMicroscopic Networks: Molecular and Cellular NetworksSocial Networks: Social Network AnalysisSoftware: Software for Network AnalysisBig Data Analytics: Big Data Analytics for Network Biology Readership: Advanced undergraduates and graduate students and researchers in biology, ecology, pharmacology, applied mathematics, computational science, etc. Keywords: Network Biology;Network Analysis;Food Webs;Molecular Networks;Social Networks;Network Pharmacology;Link Prediction;Network Dynamics;Big Data Analytics;Software;Models;Algorithms;Nodes;LinksReview:0

Advances In Systems Biology


Advances In Systems Biology
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Author : Igor I. Goryanin
language : en
Publisher: Springer Science & Business Media
Release Date : 2011-12-09

Advances In Systems Biology written by Igor I. Goryanin and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2011-12-09 with Science categories.


The International Society for Systems Biology (ISSB) is a society aimed at advancing world-wide systems biology research by providing a forum for scientific discussions and various academic services. The ISSB helps coordinate researchers to form alliances for meeting the unique needs of multidisciplinary and international systems biology research. The annual International Conference on Systems Biology (ICSB) serves as the main meeting for the society and is one of the largest academic and commercial gatherings under the broad heading of ‘Systems Biology’.

Bayesian Networks In R


Bayesian Networks In R
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Author : Radhakrishnan Nagarajan
language : en
Publisher: Springer Science & Business Media
Release Date : 2014-07-08

Bayesian Networks In R written by Radhakrishnan Nagarajan and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2014-07-08 with Computers categories.


Bayesian Networks in R with Applications in Systems Biology is unique as it introduces the reader to the essential concepts in Bayesian network modeling and inference in conjunction with examples in the open-source statistical environment R. The level of sophistication is also gradually increased across the chapters with exercises and solutions for enhanced understanding for hands-on experimentation of the theory and concepts. The application focuses on systems biology with emphasis on modeling pathways and signaling mechanisms from high-throughput molecular data. Bayesian networks have proven to be especially useful abstractions in this regard. Their usefulness is especially exemplified by their ability to discover new associations in addition to validating known ones across the molecules of interest. It is also expected that the prevalence of publicly available high-throughput biological data sets may encourage the audience to explore investigating novel paradigms using the approaches presented in the book.